Timetable

Download a course brochure

Coffee and tea will be served in AM and after lunch. Participants are responsible for their own lunches except for
Friday in which lunch will be served as part of the PALS lecture.

dot

THEME – DAY 1: CONCEPTS IN MOLECULAR BIOLOGY (REVIEW)
dot
8:30am – 12pm: Taylor-Fidler, Rm. 141  // 1pm – 4pm: Paetzold Lecture Theatre, Rm. 1891
10
TIME TITLE LECTURER
0830-0900 REGISTRATION/HOUSEKEEPING (iClicker assignment) Stephen Yip/Sohrab Shah
0900-1010 Introduction to course & central dogma and beyond Stephen Yip/Sohrab Shah
1010-1025 DICER aberrations in human cancers – clinical discovery and functional consequences Michael S. Anglesio
1030-1200 Somatic mutations and cancer – a global view of disrupted genomes and dysregulated biology Sohrab Shah
1200-1300 LUNCH
1300-1430 Sequencing technology – from sanger to illumina Martin Hirst
1430-1600 Ethics in Genomics for Pathology and Laboratory Medicine Michael M. Burgess

dot

THEME – DAY 2: DIAGNOSTIC TESTS IN ‚OMICS‘
dot
8:30am – 4:30pm: Taylor-Fidler, Rm. 141 (Jim Pattison Pavilion)
10
TIME TITLE LECTURER
0850-0900 Feedback of ‘day 1’ talks
0900-0950 Genetic tests for cardiac disorders Michael Seidman
1000-1050 Survey of practical somatic mutation testing and pathology considerations Hector Li-Chang
1100-1150 ALK translocation in NSCLC Anthony John Iafrate
1200-1250 BCCA ONCOLOGY GRAND ROUNDS (John Jambor Room – Vancouver Cancer Centre/BCCA)
Implementation of clinical somatic mutation testing – The MGH experience
Anthony John Iafrate
1330-1420 Fusion events in malignant gliomas – functional and clinical implications Anthony John Iafrate
1430-1520 Breast cancer molecular diagnostic assays in current use Torsten Nielsen
1530-1630 Personalized Oncogenomics – clinical translation of genomic discoveries Janessa Laskin

dot

THEME – DAY 3: WHOLE GENOME/TRANSCRIPTOME APPROACHES
dot
9am- 12pm: Eye Care Centre, Rm. 100 LT // 12pm – 4pm: Taylor-Fidler, Rm. 141
10
TIME TITLE LECTURER
0850-0900 Feedback of ‘Day 2’ talks
0900-0950 Systems biology approaches to molecular research in cancer – TCGA Sohrab Shah
1000-1050 Resources for human genome browsing (UCSC genome browser) Ryan Morin
1100-1150 Basic approaches to determining human genome mutation data Sohrab Shah
1200-1300 LUNCH
1300-1400 Pharmacogenomics: The problem, the science and the solution to enhancing drug safety in children Bruce Carleton
1400-1500 Data resources for cancer genomics (TCGA portal, etc…) Sohrab Shah
1500-1600 The functional impact of recurrently mutated genes for tumour progression and therapy resistance
in B cell lymphomas
Christian Steidl

dot

THEME – DAY 4: MICROBIAL GENOMICS AND METAGENOMICS
dot
8:30am – 5pm: Taylor-Fidler, Rm. 141  (Jim Pattison Pavilion)
10
TIME TITLE LECTURER
0850-0900 Feedback of ‘Day 3’ talks
0930-1020 Genomics in Medical Microbiology
(introduction to concepts, applications and lab methods)
Patrick Tang
1030-1120 Bioinformatics analysis of microbial WGS data – sequence analysis William Hsiao
1130-1220 Bioinformatics analysis of microbial WGS data – comparative genomics William Hsiao
1230-1320 LUNCH
1330-1420 Outbreak investigations using genomics data Patrick Tang
1430-1520 Metagenomics in medical microbiology (microbiome and pathogen discovery) Patrick Tang
1530-1620 Bioinformatics analysis of metagenomics data William Hsiao
1630-1650 Future directions for genomics in microbiology Patrick Tang/William Hsiao

dot

THEME – DAY 5: FUTURE TRENDS – OPPORTUNITIES AND CHALLENGES AND PANEL DISCUSSION
dot
8:30am – 5pm: Taylor-Fidler, Rm. 141 // 12:30pm – 2pm: Paetzold Lecture Theatre, Rm. 1891
10
TIME TITLE LECTURER
0850-0900 Feedback of ‘Day 4’ talks
0900-1030 Implementation of advanced molecular diagnostics into everyday pathology practice David Huntsman
1030-1200 Panel discussion – faculties
1230-1330 PROFESSIONAL ADVANCEMENT LEARNING SERIES (PALS)
PALS – patient advocate: lymphoma survivor
Jackie Ellis
1330-1400 WRAP UP  Stephen Yip & Sohrab Shah

“The UBC Pathology Genomics Core Teaching course is a self-approved group learning activity (Section 1) as defined by the Maintenance of Certification program of the Royal College of Physicians and Surgeons of Canada.”